Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803393.1_cds_XP_016484163.1_7510
CDS Infomation

[gene=LOC107804730] [db_xref=GeneID:107804730] [protein=agamous-like MADS-box protein AGL30 isoform X2] [protein_id=XP_016484163.1] [location=join(239110..239291,239606..239665,239760..239778,239871..239935,240048..240063,240166..240227,241984..242080,242916..243241,243493..243826,245829..246176)] [gbkey=CDS]
Sequence

ATGGGGAGAGCAAAATTAAAACTGCATAAGTTGGATGGTAGCAACCGCATAGGAGTATAC
TCAAGGCGGAAGAAGGGACTCTTGAAGAAAGCTAATGAGCTGTCAGTATTGTGTGACATT
GACATCTTTCTTGCCATGTTTTCACCAGGTGGAAAGCCTAGTGTATACAAGTCAGATAAC
AGTAGCTTTGAGGACGTGATTACCAAGTTTGCCGAAGTAAATCCAGAAGAAAGAGCAAAA
AGGAAGATGGAGTGCCTTGATACAATAAAGAAAGCTTGCAAGAAGTCTGATCACGATGTA
GACATAGGACAGCAGCTTTGTCCTGGGGATTTGACAACGGAGGATATCAATTTTCTCACA
CATTCATTAAGAATTCGACTTTCAGATATTGAGGGTAGAGTCAGGCTATGGAAGAATCTT
GAAAAGATTGACAGCATTCAACAACTTAGGAAAATGGAGGACTCAATATCAAAATCTCTT
AACGAAATCGCGAAACATAAGTGTGGGATGGCTTCATTAATTTTTGGTGCTGGGAAAGAT
TTTCAGCCTTCTTCAGTCCGACATGGGATTGATTCACCTTTGAACTCTGATGCTAGGAAA
GAGCTCCATCCATGTTCATCAGTCCATGCTTGTGATAGTGAAAATATTGATGTATATGAA
GACATGAATTCATTCGATTCATTTTTACTTTGTGATACTGGGCAAGATTTCCAGGCTTCT
TCACTGATGCAGCATGGGATGAATTTGGGACAAGAGCTCTATCAATGTTCATCAGTCCAC
GGTGAAAATATGGATGTATATGAGGACTTAAATTCATTTCCACTAGAGTATTTGGAGGAA
CAATCTTTTTCTTTTGAGAGCTACACAAATCTTGTTTGCAACAAAGAAATTGAAGTCTCT
ATGCCAGAATCCGTAAATTTTGTACCTGGGGAAATATTTCTGGATTGTGAAGTAAATCAG
GAAGATATTGTAACAGAATTTGGGTTTACCTTTGATGTGCCACAACTAGAACAGATGGAT
GACAAGGGAAATGCTTTTGACTGTAGCATCAACAAAGGTTCCAGACTTCCTCATTCTGAT
CTTGTTAACATCCACGATAGTTCAAAATCAGCATCTGGTACTTGTGAAAATATGATATTA
GCCGACTCTCTACACTTTCTGTATGGGATGGATTCATCAAGTTCCGATGCTGGAGAAGAG
TTTTCAACTTCTTCCTCAATCAAGCATGGGATAAATTTATCTTCAACCCAACTCGATGCA
GGCTTATCTGTCAATGGTGGTGATAGTGAAAATATGGACGATTACGAGGATCTTATTGCG
TTTGTTTCATGTTTAAAATTTGATGATGAGCACGGATTTCAGTCTTCACCATCAATTGGC
CAGTATAGTATGAATTCACCTGTAAGTTTTGATGCTGGGCAAGAGCTGCATCGATCTTCA
TCAGTCAACGGAGGTGATAGTGAAAGTATTAATGGATACGGGGACCTAAATTTGTTTGTA
CAAGGGTAA

Peptide Sequence

PEP ID

XP_016484163.1
PEP Infomation

PREDICTED: agamous-like MADS-box protein AGL30 isoform X2 [Nicotiana tabacum]
Sequence

MGRAKLKLHKLDGSNRIGVYSRRKKGLLKKANELSVLCDIDIFLAMFSPGGKPSVYKSDN
SSFEDVITKFAEVNPEERAKRKMECLDTIKKACKKSDHDVDIGQQLCPGDLTTEDINFLT
HSLRIRLSDIEGRVRLWKNLEKIDSIQQLRKMEDSISKSLNEIAKHKCGMASLIFGAGKD
FQPSSVRHGIDSPLNSDARKELHPCSSVHACDSENIDVYEDMNSFDSFLLCDTGQDFQAS
SLMQHGMNLGQELYQCSSVHGENMDVYEDLNSFPLEYLEEQSFSFESYTNLVCNKEIEVS
MPESVNFVPGEIFLDCEVNQEDIVTEFGFTFDVPQLEQMDDKGNAFDCSINKGSRLPHSD
LVNIHDSSKSASGTCENMILADSLHFLYGMDSSSSDAGEEFSTSSSIKHGINLSSTQLDA
GLSVNGGDSENMDDYEDLIAFVSCLKFDDEHGFQSSPSIGQYSMNSPVSFDAGQELHRSS
SVNGGDSESINGYGDLNLFVQG

Transcript Sequence

Gene sequence data has not been registered.